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EcosystemHere we highlight projects that depend on scvi-tools.
scArches#
scArches allows for the integration of new "query" data into reference atlases produced with conditional deep generative models like scVI, scANVI, and totalVI.
scdefg: scvi DE Flask GUI#
A GitHub repository for a single page Flask UI that allows you to quickly select cell groups and perform differential expression on single cell RNA sequencing data using scvi-tools. Application to C. Elegans data.